How Vaccines Cause Disease to Evolve

Two of the pillars of modern medicine are in trouble and it’s for the same reason – ignoring microbial evolution. Conventional medicine charged ahead with rampant antibiotic use without a full understanding of the microbiome and how our immune system works or taking into account the additional impact of eating antibiotic-treated animals regularly. Bacteria consistently exposed to low-level antibiotics has evolved past those treatments, requiring doctors to prescribe increasingly strong antibiotics to conquer these incredibly resilient bacteria. For years we’ve been treating harmful pathogens like elite athletes, giving them increasingly difficult hurdles that only the strongest survive. Now, antibiotic-resistant superbugs will kill 10 million people a year by 2050 if the way we use antibiotics doesn’t change.

Now we are finding that vaccines do the same thing with complex pathogens. The vaccine suppresses the host’s response to the pathogen but doesn’t kill it. This gives more virulent, more quickly replicating bacteria a chance to multiply without killing the host. No one dies…but the bacteria evolves to the point that the vaccine is no longer effective.

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Whooping Cough

People vaccinated for pertussis are carriers of the whooping cough bacteria, even if they never contract the illness. In that respect, the vaccine succeeds…but only in the short term. Since the host of the pathogen doesn’t expire from it, the bacteria develop into a stronger version of pertussis. Caused by the bacteria Bordetella pertussis, whooping cough has never been eradicated and the number of cases has been slowly increasing for years. Conventional news outlets are quick to blame anti-vaxxers every time there’s an outbreak of whooping cough, an easier solution than examining the effectiveness of the vaccine.

The whooping cough vaccine was first modified in 1992 on a recommendation from the Centers for Disease Control after it was linked to seizures. The new version targets specific proteins in the bacteria, which is the perfect opening for other proteins to fill the power vacuum. Like antibiotics, microbes that don’t get targeted are able to thrive. While research has periodically called for an examination of the vaccine as reported cases of pertussis increase, a 2014 study from Australia confirms that the strains of whooping cough not targeted by the vaccine are thriving. Ruiting Lan, senior author of the latest study on whooping cough and associate professor at School of Biotechnology and Biomolecular Sciences at the University of New South Wales says, “It’s like a game of hide and seek. It is harder for the antibodies made by the body’s immune system in response to vaccination to ‘search and destroy’ the whooping cough bacteria which lack pertactin. This could mean that these pertactin-free strains have gained a selective advantage over bacterial strains with the pertactin protein.” In the course of four years, the percentage of whooping cough samples that lacked the protein targeted by the vaccine jumped over 70 percent. And that’s just in Australia. Lan also commented that “The fact that they have arisen independently in different countries suggests this is in response to the vaccine. More studies are needed to better understand the effects of vaccination on the evolution of the organism…”

Marek’s Disease

Another example of disease evolution in relation to vaccines is Marek’s Disease, a deadly ailment affecting chickens that has evolved enough to render two vaccines irrelevant and costs the poultry industry more than 2 billion dollars a year. Andrew Read, a scientist Pennsylvania State University Center for Infectious Disease Dynamics, believes that the vaccine may be causing more harm than good. He’s been researching how vaccines allow bacteria and viruses to evolve and gain virulence for over 15 years and is also associated with the concept of “leaky” vaccines. Leaky vaccines, also called imperfect vaccines, save the vaccinated individual from death but turn them into a disease incubator. In his study of Marek’s Disease, Read linked leaky vaccine and increased microbe virulence.

When vaccines prevent transmission, as is the case for nearly all vaccines used in humans, this type of evolution towards increased virulence is blocked. But when vaccines leak, allowing at least some pathogen transmission, they could create the ecological conditions that would allow hot strains to emerge and persist. This theory proved highly controversial when it was first proposed over a decade ago, but here we report experiments with Marek’s disease virus in poultry that show that modern commercial leaky vaccines can have precisely this effect: they allow the onward transmission of strains otherwise too lethal to persist. Thus, the use of leaky vaccines can facilitate the evolution of pathogen strains that put unvaccinated hosts at greater risk of severe disease. The future challenge is to identify whether there are other types of vaccines used in animals and humans that might also generate these evolutionary risks.”

Marek’s Disease affects chickens, which doesn’t sound scary. The disease isn’t going to just jump to humans…that’s not how things work. But if we’re learning anything, it’s that science’s refusal to seriously consider and investigate vaccines mean that we don’t know exactly how things work.

Related:How To Detoxify and Heal From Vaccinations – For Adults and Children

We Cannot Keep Up

Vaccines are designed to target a specific strain of a bacteria or virus and encourages the immune system to defeat it. The vaccine and its response are frequently victorious. But that focus has ignored the realities of infection and the way microbes evolve. The defeating a particular pathogen or strain of bacteria leaves room for another one to take its place. In the case of Marek’s Disease, the third iteration of the vaccine still works, but there isn’t a new one in the works.

In its success, the vaccine has opened the door to a host of other issues that modern medicine won’t be ready for until it’s too late. Of course, we won’t be ready. You can’t fix something until you admit there’s a problem, and admitting that vaccination causes serious issues is too costly an error to cop to.

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The Gut-Brain Connection – How it Affects Your Life

Your brain is the commander-in-chief of your body. It constantly receives information from your internal and external environment and decides the best course of action to take for your survival. The brain carries out this action by sending messages through the nerves of the nervous system to the appropriate parts of the body.

For example, when the sympathetic nervous system is activated, it will help simultaneously change the behavior of the heart, lungs, eyes, brain, digestive system, adrenal glands, bladder, and skeletal muscles. All of this is done to achieve one goal – survival. On the other hand, the parasympathetic branch of the nervous system stimulates digestion, recovery, and rest throughout the organs of the body when we are not faced with a threat.

These two branches of the autonomic nervous system help us explain how our brain controls our body, but can our body control our brain?

You are the Sum of Your Neurobiology

In his book, Incognito: The Secret Lives of the Brain, Neuroscientist David Eagleman explains:

…who you are depends on the sum total of your neurobiology.”

Neurobiology is dictated by more than just the brain. Just like any government, even a dictatorship, the leader is influenced by other members of the governing body. Even though the brain can affect every organ in the body through the sympathetic and parasympathetic branches of the nervous system, the brain cannot veto the power of the gut.

Other common diseases like Alzheimer’s and Parkinson’s may actually start in the gut.

Our Second Brain

The gut is sometimes known as our second brain. In fact, it has its own branch of the nervous system called the enteric nervous system that can function on its own, even if it is disconnected from the brain.

The enteric nervous system also resembles a brain because it:

  • has glial cells to support the neurons in the gut
  • contains 500 million neurons
  • uses 40 (and possibly many more) neurotransmitters
  • produces 50% of the body’s dopamine (important for motility)
  • produces 95% of the body’s serotonin (important for the enteric nervous system’s growth & cell protection)
  • has a barrier that resembles the blood brain barrier
  • may even have its own memory

How the Gut Influences the Brain

The brain and gut are intimately connected by the vagus nerve. The vagus nerve connects with most of the organs and plays a prominent role in activating the parasympathetic nervous system.

Around 90% of the signals passing along the vagus nerve come not from the brain, but from the enteric nervous system to the brain. This is because one of the brains most effective ways of learning about its environment is through the gut, and this relationship starts before we are even exposed to the outside environment.

The Development of the Brain & Gut Connection

When we were in the womb, we were constantly picking up signals about the outside environment.

Is there enough food?

Is it safe out there?

What adaptions will I need now to ensure survival?

All of these questions were answered by the chemical signals that we received from our mothers through the umbilical cord, and the development of our brain and gut depended heavily on these signals. For example, if there was a lack of nutrition in our mother’s diet, we may be predisposed to obesity due to altered metabolic function.

What we are feed in our youth also greatly impacts the development of our gut and its enteric nervous system. Breastmilk is essential because it promotes oxytocin and serotonin release, which promotes gut growth and the development of a healthy gut microbiome. When the gut is able to develop with a healthy gut microbiome, the risk of food allergies and gut issues later on in life is greatly reduced. A damaged gut, on the other hand, increases the risk of obesity, depression, anxiety, autism, multiple sclerosis, and cardiovascular disease.

Other common diseases like Alzheimer’s and Parkinson’s may actually start in the gut. For example, in people that died from Parkinson’s disease, scientists found the same protein clumps that damage dopamine-producing neurons in the gut as they did in the brain. The same phenomenon exists in people with Alzheimer’s disease. Plaques and tangles that form in the brain of people with Alzheimer’s disease also form in their gut. This means that we may be able to use gut biopsies to diagnose and treat these conditions before they take hold of the brain.

Stress and the Gut

When we are stressed our sympathetic nervous system is activated to prepare our body for survival. At the same time, the hormone Ghrelin is released from our stomach. Ghrelin is known as our hunger hormone because it stimulates appetite and promotes fat storage. This explains why when we are stressed we may feel the compulsive need to eat.

Ghrelin also inhibits serotonin activity, which leads to digestive issues and increased anxiety and depression over time. Anxiety leads to more ghrelin production, and this starts a vicious cycle of stress that may have been triggered by a stressful fetal or neonatal environment.

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Irritable Bowel Syndrome – When Gut & Brain Disharmony Becomes Chronic

Stress also increases the risk of irritable bowel syndrome (IBS), a digestive disorder that affects 10-15% of the world population. IBS  is what happens when the enteric nervous system, gut, gut microbiome, and brain are in disharmony.

It usually begins with a stressful childhood. Traumatic events, like maternal separation, can lead to a dysfunctional connection between the brain and gut. If these children are also feed the wrong food, their gut microbiome will not develop correctly. This establishes a dysfunctional gut microbiome that does not produce the substances needed for a healthy gut and a healthy enteric nervous system.

If the child continues to be deprived of nutrient dense food and human connection, their immune system will become hyperactive, leading to food allergies and a chronic state of stress. This vicious cycle of brain, gut, and gut microbiome disharmony continues into adulthood until it is defined as IBS.

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The Gut, Brain, and Behavioral Disorders

The enteric nervous system, gut, gut microbiome, and brain disharmony play an essential role in the development of neurological/behavioral disorders like autism, ADHD, and various mood disorders. Antibiotics, environmental, infectious agents like vaccines, and other forms of neonatal stress create gut dysbiosis (imbalance in gut bacteria) and vagus nerve dysfunction. These two factors set the stage for neurological/behavioral disorders by stimulating an already hyperactive immune system and sympathetic nervous system that causes children to be extremely impulsive and in a state of persistent hyper-arousal. If these children are then fed a highly refined diet that keeps their blood sugar levels high, their symptoms will continue to get worse.

You may have actually experienced a small taste of what it’s like to have ADHD or autism the last time you ate processed foods filled with toxins. When you eat highly refined, toxin laden foods, your body must fire up its immune system and sympathetic nervous system to protect you from the threat. This will cause blood flow to be directed away from your prefrontal cortex while your blood sugar rises. When your blood sugar is high, it creates plaque build up in the brain and impairs blood vessel function, which reduces  your cognitive abilities. Combine that with the lack of activity in your prefrontal cortex, and you will feel impulsive and anxious and make illogical decisions.

When you add stress and poor food choices together, it creates a cascade of negative effects in the gut microbiome, gut, enteric nervous system, and the brain that lead to poor decision-making, a greater incidence of pain, more allergies, and more disease.

But don’t worry, even if your environment was filled with stress and poor food options from the womb to adulthood, even if you were diagnosed with ADHD, IBS, autism, depression, chronic pain, Parkinson’s disease, and/or Alzheimer’s disease, you can still restore the harmony between your gut, gut microbiome, enteric nervous system, and brain.

Synchronizing the Gut and Brain

One of the most effective ways to improve your health is by starting with what you put in your body. When you feed your body what it needs while eliminating the foods that cause issues, you will establish a healthy gut microbiome, heal your gut lining, and improve the function of your enteric nervous system. This will send the message to the brain that you are not under attack, the immune system will calm down, and your body will be able to rest and reverse disease.

Improving Brain Health with the Gut

Limit Your Consumption of FOD MAPs

FOD MAPs is an acronym that stands for:

  • Fermentable – meaning they are only broken down through fermentation
  • Oligosaccharides – made up of individual sugars joined together in a chain
  • Disaccharides – a double sugar molecule
  • Monosaccharides – a single sugar molecule
  • And Polyols – sugar alcohols

These are short-chain carbohydrates that tend to be poorly digested by those with digestive issues like IBS. This is because when the FOD MAPs make their way through the digestive tract, they draw water into the large intestine from surrounding areas, which leads to bloating. Simultaneously, the bacteria in the large intestine starts digesting the FOD MAPs and producing gas which builds up along with the water. The intestines expand, the message is sent to the brain, and it responds with more pain, discomfort, and stress.

Eating a low FOD MAP diet has showed promising effects in treating people with IBS and may transfer to others with a comprised digestive system. It is commonly suggested to limit the consumption of  FOD MAPs for 3-8 weeks to help balance the gut microbiome, heal the gut, and reduce symptoms. After that time, it is best to slowly re-introduce high FOD MAP foods into your diet to see which ones are safe to eat and which ones cause the most issues for you.

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Eliminate Foods that Cause Problems for You

Food sensitives and allergies are becoming more and more common and the link between stress, the immune system, and the gut is mostly to blame. When the body is in a stressed and inflamed state, your immune system and gut may react to previously harmless foods as if they are a threat to the body.

To reduce your food sensitives and allergic reactions, start by eliminating these common, allergy-causing foods from your diet:

  • Milk
  • Eggs
  • Peanuts
  • Tree Nuts
  • Soy
  • Grains with gluten in them (wheat, barley, rye, and oats)
  • Fish
  • Shellfish

When you eliminate some of these foods from your diet, you may notice that you have more energy and less stress. This is a sign that you may be sensitive or allergic to one or more of the foods that you eliminated. Keep in mind that almost any food can trigger an allergy. If a certain food item always makes you feel worse after eating it then it is safe to say that you should eliminate it from your diet.

Think of this approach as a temporary experiment designed to see what the ideal diet is for you. After a couple weeks of eliminating a specific food from your diet, try periodically reintroducing that food back in. You may find that you can eat eggs or almonds again, and they make you feel energized now!

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Increase Your Fiber Intake

Fiber cannot be broken down by the body, so bacteria in the intestines feast on it. As a result, the bacteria produce butyrate. This short chain fatty acid helps to improve the function of the digestive tract and protect and enhance brain function.

Supplement with Probiotics

Probiotics have been found to reduce anxiety and depression. In studies done on mice, the amount of lactobacillus in their gut effected the amount of a metabolite in the blood called kynurenine, which has been shown to drive depression. Probiotics also help produce serotonin in the gut, which has protective effects against irritable bowel syndrome, cardiovascular disease, and osteoporosis.

Recommended Reading: Probiotics, Bacteria, and Our Health

Make Sure You Consume Enough Folate and Vitamin B12

Folate and Vitamin B12 are essential for brain health, nervous system function, and overall health. They also help to prevent depression and heart disease. On its own Vitamin B12 decreases the loss of brain volume with age, while increasing cognitive function.

Although these vitamins are produced by the gut microbiome, we are not sure how much is actually made and absorbed by the body. It’s best to make sure you are consuming animal products like pasture raised eggs for Vitamin B12 and plenty of organic dark leafy green vegetables for folate.

Increase Your Intake of Omega 3s and Decrease Omega 6s

The omega 3 fatty acids, DHA and EPA, are effective at reducing the symptoms of depression, and positive effects may carry over to other neurological disorders as well. This is partly due to the decrease in inflammation that is associated with diets that are lower in omega 6s and higher in omega 3s.

To decrease the amount of omega 6s in your diet, replace vegetable, seed, and soybean oils with highly saturated fats like coconut oil, butter, ghee, and tallow. If you need a liquid oil for salad dressing use avocado oil or olive oil.

Omega 3s are best when consumed as minimally cooked and processed as possible. Wild caught salmon, sardines, mackerel, and oysters are great sources of DHA and EPA.

Before You Eat, Improve Your Gut with Your Mind

Before you take the first bite of food from your brain and gut revitalizing meal, take a deep diaphragmatic breath. This will stimulate your vagus nerve and prepare your body to digest your food. Chew each bite thoroughly, enjoy every flavor, and take at-least one deep breath after every couple of bites.

Use your brain to improve your gut and your gut to improve your brain. If you apply this advice to your life, you will replace the vicious cycle of disease with a nutritious cycle of vitality.

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Antibiotic Side Effects Are Contagious – C. Diff Infections Are On the Rise

The gut microbiome is getting some recognition lately. Scientists are finding increasing evidence that the delicate balance of the gut is responsible for making and keeping us healthy. The focus of the microbiome has turned attention to antibiotics and the damage we are doing by overusing them. Antibiotics disrupt the natural balance of the gut, destroying beneficial bacteria and allowing pathogens to thrive unchecked. If you’re not using prescription antibiotics there are plenty of other sources you’re likely getting it from.

A microbiota is “the ecological community of commensal, symbiotic and pathogenic microorganisms that literally share our body space”- Wikipedia

The Nitty-Gritty

…a recent study found that occupying the same hospital room as someone who has been given antibiotics increases your likelihood of developing a bacterial infection…

C. diff is a bacteria that inflames the colon and is spread by spores from person to person. C. diff exists throughout organic environments (water, air, human and animal waste, earth, and food products) and for some people, the bacteria can exist in the intestine without ever making its host sick. When it does cause an infection, symptoms range from watery diarrhea and mild cramping to more severe cramping and diarrhea, kidney failure, fever, and dehydration. Potentially deadly,  C. diff is especially common in hospital settings due to the widespread use of antibiotics. Much like Candida, C. diff thrives when antibiotics wipe the good bacteria from the intestine, leaving it unable to fight off the infection. C. diff is also quite hardy, and the spores that spread it can survive outside of the body for up to 90 days.

With the Rise of Antibiotics Comes the Rise of Everyday Infections

Overprescribed to humans and animals, antibiotics have invaded our lives in multiple ways, forcing crafty bacteria, fungi, and viruses to adapt. The recommended conventional treatment for C. diff is antibiotics, which seems crazy, as antibiotics created the ideal environment for C. diff to thrive.

Rates of C. diff infections are rising in and out of hospitals and in populations not traditionally susceptible to it, like children or people without a history of antibiotic use. So why is it spreading to these populations? The reason behind the increase of C. diff infections in children can be explained by the increasing amounts of antibiotics they’re exposed to both internally and environmentally.

Even if you aren’t using antibiotics yourself, a recent study found that occupying the same hospital room as someone who has been given antibiotics increases your likelihood of developing a bacterial infection like Clostridium difficile colitis (or C. diff).

The world seems determined to impact our health through antibiotics in one way or another. The idea that someone taking antibiotics in the same room as you is enough to increase your chance of a bacterial infection is scary. Also scary; the question why does it affect you. If antibiotics have the potential to do that much damage to our vital and not even fully understood microflora, what have we been doing to ourselves and when is the bottom going to fall out of this whole thing?

Taking a Step Back

So let’s take a step back from antibiotics. If you’re reading this, on this website, you’ve probably started choosing the meat you eat very carefully, if you even eat meat at all. A diet consisting of fresh, raw, organic produce (big, beautiful salads with over twenty veggies in them) gives your body and immune system the nutrition it needs, and exercise also plays a part. In the event a bacterial or fungal infection occurs, paying attention to your body and catching it early gives you the chance to take care of yourself.

Of course, that isn’t everything, and sometimes we eat something we shouldn’t or there’s a particularly nasty little bug hanging around. Supplements like Oil of Oregano, Coptis Chinesis, or a good Detox can provide relief. Antibiotics are not your first answer.  Antibiotics were designed as a medicine of last resort, so make them that.

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